262272 NADB_Rossmann superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262272 chr_4 NADB_Rossmann superfamily 1781104 1783055 + NADB_Rossmann superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451939 Thaps262272.1, Thaps262272.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0371

Most Highly Correlated Transcripts

24525

hypothetical protein
0.9071

36007

Aldolase_II superfamily
0.9027

268257

fabG
0.902

21455

hypothetical protein
0.8794

3520

hypothetical protein
0.8753

10673

hypothetical protein
0.8743

37497

cysE
0.8715

2571

hypothetical protein
0.8699

264556

FBPase
0.8691

30701

PRK05279
0.8663

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SDR_c classical (c) SDRs; SDRs are a functionally diverse family of oxidoreductases that have a single... cl09931 144.349 2.46E-39 395 - 611 specific 212491
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 184.51 8.61E-53 1 - 336 superfamily 263925
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 184.51 8.61E-53 1 - 336 superfamily 263925
WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate... - 104.639 8.83E-25 1 - 360 multi-dom 223528
PRK13394 3-hydroxybutyrate dehydrogenase; Provisional - 91.1104 1.62E-20 377 - 617 multi-dom 184025

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_35637 PHATRDRAFT_35637 Not available Not available 232614 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016491 GO:0004316 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004316

3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity

Details: 
Catalysis of the reaction: (3R)-3-hydroxyacyl-[acyl-carrier protein] + NADP+ = 3-oxoacyl-[acyl-carrier protein] + NADPH + H+.
GO Category: 
MF

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