262318 (Fpg) MeNeil3_N
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
262318 chr_4 (Fpg) MeNeil3_N 2099595 2100986 - MeNeil3_N
NCBI ID Ensembl Genomes exon ID
7451378 Thaps262318.1, Thaps262318.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0374
hypothetical protein
0.9844
NADB_Rossmann superfamily
0.9054
hypothetical protein
0.8961
SIR2 superfamily
0.8826
PRK07777
0.8815
hypothetical protein
0.8802
Leu_Phe_trans superfamily
0.8775
KU superfamily
0.8732
DUF563
0.8729
hypothetical protein
0.8715
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MeNeil3_N N-terminal domain of metazoan Nei-like glycosylase 3 (NEIL3); This family contains the N-terminal... cl03119 154.494 6.48E-45 1 - 147 specific 176803
FpgNei_N superfamily N-terminal domain of Fpg (formamidopyrimidine-DNA glycosylase, MutM)_Nei (endonuclease VIII) base-... - 154.494 6.48E-45 1 - 147 superfamily 261594
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 225447 183643 Not available Not available Not available Not available
KEGG description KEGG Pathway
Base excision repair map03410
GO:0006281 GO:0008270 -

DNA repair

Details: 
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO Category: 
BP

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF
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