262395 DUF2453
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262395 chr_5 DUF2453 211766 212533 - DUF2453

Synonyms

NCBI ID Ensembl Genomes exon ID
7448463 Thaps262395.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0367

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9347

9115

DnaJ
0.9214

37934

GRX_PICOT_like
0.9194

30701

PRK05279
0.913

261400

NA
0.9096

4064

NADB_Rossmann superfamily
0.9043

8068

caca2
0.9009

269624

TIM_phosphate_binding superfamily
0.8999

37497

cysE
0.8974

29237

(TUB4) PLN00222
0.8923

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF2453 superfamily Protein of unknown function (DUF2453); Some members of this family are purported to contain GAF... - 125.523 5.43E-36 1 - 105 superfamily 151064
DUF2453 superfamily Protein of unknown function (DUF2453); Some members of this family are purported to contain GAF... - 125.523 5.43E-36 1 - 105 superfamily 151064
GAF Domain present in phytochromes and cGMP-specific phosphodiesterases; Mutations within these domains... cl17456 63.9396 4.31E-13 117 - 252 specific 214500
GAF superfamily GAF domain; This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl... - 63.9396 4.31E-13 117 - 252 superfamily 266697

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 154141 218980 449715 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments