262530 TB2_DP1_HVA22
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262530 chr_5 TB2_DP1_HVA22 1222455 1223036 - TB2_DP1_HVA22

Synonyms

NCBI ID Ensembl Genomes exon ID
7450077 Thaps262530.2, Thaps262530.1, Thaps262530.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0144

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0161
 0.36

Most Highly Correlated Transcripts

bd1793

(bd1793) NA
0.8648

bd1841

(bd1841) CAP10 superfamily
0.8561

41632

Asp
0.8505

bd410

(bd410) HNHc
0.8406

7977

hypothetical protein
0.8354

25347

hypothetical protein
0.8276

bd937

(bd937) Chalcone superfamily
0.8273

bd1808

(bd1808) NA
0.8266

20708

MPP_ACP5
0.8221

23779

hypothetical protein
0.8133

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TB2_DP1_HVA22 TB2/DP1, HVA22 family; This family includes members from a wide variety of eukaryotes. It includes... cl19882 121.521 2.95E-36 1 - 84 specific 251750
TB2_DP1_HVA22 superfamily TB2/DP1, HVA22 family; This family includes members from a wide variety of eukaryotes. It includes... - 121.521 2.95E-36 1 - 84 superfamily 268235

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43671 PHATRDRAFT_43671 200357 302073 244952 Cre03.g177500.t1.1 AT4G36720.1 492117

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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