262575 DHOD_1A_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262575 chr_5 DHOD_1A_like 1530958 1532271 - DHOD_1A_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7448154 Thaps262575.1, Thaps262575.2, Thaps262575.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0208

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0215
 0.25

Most Highly Correlated Transcripts

1553

PKc_like superfamily
0.9172

23616

Peptidase_A22B superfamily
0.9088

5638

hypothetical protein
0.9066

34187

(ACAS2) PRK00174
0.9033

9947

hypothetical protein
0.895

37662

ATPase-IIA1_Ca
0.8903

268541

(UBA1) Ube1
0.889

35518

(GYK) PLN02295
0.8819

5246

hypothetical protein
0.8806

3154

(Tp_HSF_1b) HSF_DNA-bind
0.8787

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) class 1A FMN-binding domain. DHOD catalyzes the oxidation of (S... cl17186 300.396 1.42E-99 6 - 313 specific 240092
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 300.396 1.42E-99 6 - 313 superfamily 266538
PLN02495 oxidoreductase, acting on the CH-CH group of donors - 92.9784 2.56E-21 3 - 349 multi-dom 215273

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48112 PHATRDRAFT_48112 159735 320802 447879 Cre13.g578750.t1.2 AT3G17810.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004152 GO:0006207 GO:0004158 -

GO:0004152

dihydroorotate dehydrogenase activity

Details: 
Catalysis of the reaction: (S)-dihydroorotate + A = AH(2) + orotate.
GO Category: 
MF

GO:0006207

'de novo' pyrimidine nucleobase biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.
GO Category: 
BP

GO:0004158

dihydroorotate oxidase activity

Details: 
Catalysis of the reaction: (S)-dihydroorotate + O(2) = H(2)O(2) + orotate.
GO Category: 
MF

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