262599 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262599 chr_5 HA 1667689 1669397 + HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7448184 Thaps262599.1, Thaps262599.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0320

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0041
 0.50

Most Highly Correlated Transcripts

268443

SAICAR_synt_Sc
0.895

37100

Zn-ribbon_RPC11
0.8921

2116

DUF1336 superfamily
0.8766

263961

(Tp_Myb1R1) MYB DNA binding protein/ transcription factor-like protein
0.8742

6953

PRK11713
0.8708

3998

PLN02485
0.8675

268574

Tim17
0.8666

19158

GRX_PICOT_like
0.8644

5332

hypothetical protein
0.863

263046

HA
0.8607

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 58.4709 7.34E-11 457 - 518 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 58.4709 7.34E-11 457 - 518 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 58.4709 7.34E-11 457 - 518 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 58.4709 7.34E-11 457 - 518 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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