6953 PRK11713
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6953 chr_7 PRK11713 896158 897517 - PRK11713

Synonyms

NCBI ID Ensembl Genomes exon ID
7444110 Thaps6953.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0295

Most Highly Correlated Transcripts

268443

SAICAR_synt_Sc
0.9472

261017

Methyltransf_2 superfamily
0.9053

24619

2-Hacid_dh_1
0.9028

4517

hypothetical protein
0.9023

21685

PLN02651
0.8951

1150

RsuA
0.8923

268574

Tim17
0.8894

17880

HD_3
0.8874

2890

hypothetical protein
0.8871

8397

hypothetical protein
0.8869

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PRK11713 16S ribosomal RNA methyltransferase RsmE; Provisional cl00611 161.205 3.56E-46 136 - 448 specific 236959
Methyltrans_RNA superfamily RNA methyltransferase; RNA methyltransferases modify nucleotides during ribosomal RNA maturation in... - 161.205 3.56E-46 136 - 448 superfamily 260530

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 250922 37710 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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