262815 (Tp_Myb1R_SHAQKYF2) MYB DNA binding protein/ transcription factor-like protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262815 chr_6 (Tp_Myb1R_SHAQKYF2) MYB DNA binding protein/ transcription factor-like protein 729866 730582 + MYB DNA binding protein/ transcription factor-like protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7448607 Thaps262815.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0346

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0022
 0.44

Most Highly Correlated Transcripts

262607

WD40 superfamily
0.9235

4959

hypothetical protein
0.9212

2065

hypothetical protein
0.9192

bd687

(bd687) NA
0.914

4108

hypothetical protein
0.9134

263947

SNF2_N
0.9126

34228

Strumpellin superfamily
0.9094

9910

Peptidase_C19 superfamily
0.9087

262171

CAP_ED
0.9063

263859

GH18_chitinase-like superfamily
0.9063

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 155665 Not available Not available Cre12.g514400.t1.2 AT3G09600.2 373030

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005634 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

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