262607 WD40 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262607 chr_5 WD40 superfamily 1719569 1723793 + WD40 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0263

Most Highly Correlated Transcripts

263947

SNF2_N
0.958

262527

pi 4-kinase
0.9504

14616

Motor_domain superfamily
0.9494

2065

hypothetical protein
0.9448

12602

MYSc
0.9447

263191

PLN03076
0.9441

262645

Glyco_18
0.9432

4959

hypothetical protein
0.9424

12500

SNF2_N
0.9414

262171

CAP_ED
0.9405

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 110.888 2.41E-26 316 - 625 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 83.5995 7.31E-17 316 - 691 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 182688 121574 Not available Cre02.g078150.t1.1 AT5G49430.1 308854

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003847 -

GO:0003847

1-alkyl-2-acetylglycerophosphocholine esterase activity

Details: 
Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate.
GO Category: 
MF

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