262925 FAA1
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
262925 chr_6 FAA1 1257707 1260333 - FAA1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0064
Normalized Mean Residue
Thaps_bicluster_0036
0.41
hypothetical protein
1
(bd1161) NA
0.97
hypothetical protein
0.8873
(bd718) PRK10387
0.8792
SGL
0.873
(bd789) ABC_ATPase superfamily
0.8683
hypothetical protein
0.8667
(bd1893) NA
0.8659
(bd634) NA
0.8653
2OG-FeII_Oxy_3 superfamily
0.8652
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AFD_class_I superfamily Adenylate forming domain, Class I; This family includes acyl- and aryl-CoA ligases, as well as the... - 376.871 2.06E-122 143 - 737 superfamily 266508
FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] - 420.57 3.83E-137 114 - 743 multi-dom 223953
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12420 PHATRDRAFT_12420 Not available Not available Not available Cre06.g299800.t1.2 AT3G23790.1 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0004197 GO:0006508 GO:0003824 GO:0008152 GO:0004467 -

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

long-chain fatty acid-CoA ligase activity

Details: 
Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; a long-chain fatty acid is a fatty acid with a chain length between C13 and C22.
GO Category: 
MF
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