263081 PLN00113Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
263081	chr_7	PLN00113	390893	393091	+	PLN00113

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448952	Thaps263081.3, Thaps263081.2, Thaps263081.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0096

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0030	0.47	0.00000015 1000

Most Highly Correlated Transcripts

262378 (FRU1) hypothetical protein 0.8798	25075 hypothetical protein 0.8766	10836 hypothetical protein 0.8664	25814 hypothetical protein 0.8663	22304 hypothetical protein 0.8639	23814 probable serine protease inhibitor 0.8605
21606 plant_peroxidase_like superfamily 0.8595	264656 Tryp_SPc 0.8528	2635 RCC1 0.8513	4385 hypothetical protein 0.8497

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN00113		leucine-rich repeat receptor-like protein kinase; Provisional	-	148.458	1.73E-37	225 - 566	multi-dom	215061

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_39117	PHATRDRAFT_39117	181765	252603	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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