263135 VATPase_H superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263135 chr_7 VATPase_H superfamily 720207 721901 - VATPase_H superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452279 Thaps263135.2, Thaps263135.3, Thaps263135.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0447

Most Highly Correlated Transcripts

bd1765

(bd1765) NA
0.914

13448

Sec1
0.8918

bd1078

(bd1078) NA
0.8912

12899

AAA
0.8854

17095

NIF
0.8847

16295

FBPase
0.8786

bd672

(bd672) NA
0.8706

bd218

(bd218) Chloroa_b-bind superfamily
0.8695

bd1160

(bd1160) Chloroa_b-bind superfamily
0.8694

31598

cyclophilin superfamily
0.8671

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
VATPase_H superfamily VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the... - 206.483 3.04E-60 224 - 496 superfamily 238159

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43023 PHATRDRAFT_43023 Not available Not available Not available Cre01.g027800.t1.2 AT3G42050.1 Not available

KEGG

KEGG description KEGG Pathway
Phagosome map04145

GO Terms

GO:0003936 GO:0046933 GO:0046961 -

GO:0003936

NA

Details: 
NA
GO Category: 
NA

GO:0046933

proton-transporting ATP synthase activity, rotational mechanism

Details: 
Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.
GO Category: 
MF

GO:0046961

proton-transporting ATPase activity, rotational mechanism

Details: 
Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.
GO Category: 
MF

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