263178 (HCD1) NADB_Rossmann superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263178 chr_7 (HCD1) NADB_Rossmann superfamily 900247 901205 + NADB_Rossmann superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449240 Thaps263178.3, Thaps263178.1, Thaps263178.4, Thaps263178.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0144

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0161
 0.36

Most Highly Correlated Transcripts

bd410

(bd410) HNHc
0.9558

bd1841

(bd1841) CAP10 superfamily
0.9434

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9383

23830

(GCD1) GCD
0.9278

269513

PTZ00461
0.918

26991

GRX_GRXh_1_2_like
0.8966

39241

Ras_like_GTPase superfamily
0.8929

bd1808

(bd1808) NA
0.8882

32067

PTZ00182
0.8873

28651

(AAT1_1) PLN02644
0.8844

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 331.946 1.70E-114 3 - 259 superfamily 263925
fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated - 161.9 3.09E-48 1 - 253 multi-dom 235500

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_41886 PHATRDRAFT_41886 229426 223247 236675 Not available Not available 284787

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0008152 GO:0016491 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

Add comment

Log in to post comments