263332 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
263332	chr_8	ANK	80428	81630	+	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452401	Thaps263332.2, Thaps263332.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0264

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0041	0.50

Most Highly Correlated Transcripts

37638 HrpA 0.9172	261495 Peptidase_M36 0.9167	264679 Syja_N 0.9153	264072 (HSF43) HSF_DNA-bind superfamily 0.915	8518 hypothetical protein 0.9147	12500 SNF2_N 0.9121
9910 Peptidase_C19 superfamily 0.9098	596 Adaptin_N 0.9093	262826 DUF3608 superfamily 0.9074	262527 pi 4-kinase 0.9062

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	69.3346	1.25E-14	66 - 151	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	69.3346	1.25E-14	66 - 151	superfamily	238125

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_40147	PHATRDRAFT_40147	139812	66591	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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