263431 Ptr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263431 chr_8 Ptr 858019 861969 + Ptr

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0030

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0287
 0.36

Most Highly Correlated Transcripts

bd392

(bd392) DEXDc
0.9155

bd1949

(bd1949) NA
0.9113

262510

Alg6_Alg8 superfamily
0.8995

bd624

(bd624) Glyco_transf_34 superfamily
0.8876

bd446

(bd446) HrpA
0.8796

36669

TPT
0.8794

bd1777

(bd1777) NA
0.8766

1383

(PDS1) phytoene_desat
0.8714

261400

NA
0.8708

268592

VDE superfamily
0.8681

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_M16 superfamily Insulinase (Peptidase family M16); Insulinase (Peptidase family M16). - 106.626 2.94E-26 57 - 193 superfamily 250047
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 87.9165 1.70E-19 239 - 441 superfamily 253075
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 87.9165 1.70E-19 239 - 441 superfamily 253075
Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification,... - 424.479 2.10E-131 33 - 980 multi-dom 223956

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47929 PHATRDRAFT_47929 195622 220960 74380 Not available AT1G06900.1 491157

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0006508 GO:0016919 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0016919

NA

Details: 
NA
GO Category: 
NA

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