263491 (Tp_AP2-EREBP10) pathogenesis-related transcription factor
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263491 chr_9 (Tp_AP2-EREBP10) pathogenesis-related transcription factor 195682 197424 - pathogenesis-related transcription factor

Synonyms

NCBI ID Ensembl Genomes exon ID
7445004 Thaps263491.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0247

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9925

25228

hypothetical protein
0.894

268443

SAICAR_synt_Sc
0.8815

5641

hypothetical protein
0.8791

263930

BioC
0.8776

262215

YEATS
0.8766

9514

hypothetical protein
0.8762

23085

VHS_ENTH_ANTH superfamily
0.876

6316

hypothetical protein
0.8699

5760

SART-1
0.8697

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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