23085 VHS_ENTH_ANTH superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23085 chr_6 VHS_ENTH_ANTH superfamily 789857 791780 - VHS_ENTH_ANTH superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443606 Thaps23085.1, Thaps23085.3, Thaps23085.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0248

Most Highly Correlated Transcripts

9514

hypothetical protein
0.8974

23469

Plus-3
0.8908

267979

HCO3_cotransp superfamily
0.8882

4757

Leo1
0.887

268443

SAICAR_synt_Sc
0.8828

8006

Asp_Arg_Hydrox superfamily
0.8805

40200

TRX_reduct
0.8791

263491

(Tp_AP2-EREBP10) pathogenesis-related transcription factor
0.876

16114

PLN02350
0.8734

8432

TAF7
0.8719

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
VHS_ENTH_ANTH superfamily VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain.... - 63.8349 2.61E-12 28 - 152 superfamily 261334

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47180 PHATRDRAFT_47180 275631 238996 Not available Not available AT4G04885.1 523011

KEGG

KEGG description KEGG Pathway
mRNA surveillance pathway map03015

GO Terms

Not available -

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