263685 PGDH
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263685 chr_10 PGDH 650466 651884 - PGDH

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0401

Most Highly Correlated Transcripts

16114

PLN02350
0.8783

bd1842

(bd1842) NA
0.8779

11307

ABC_ATPase superfamily
0.8644

7311

LSm8
0.8569

6087

hypothetical protein
0.8539

37571

BCDHK_Adom3
0.8534

34227

B56
0.8502

270222

0.8481

15351

PKc_like superfamily
0.8466

3043

HA
0.8465

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PGDH Prostaglandin dehydrogenases; Prostaglandins and related eicosanoids are metabolized by the... cl16912 361.029 1.39E-122 12 - 382 specific 176190
MDR superfamily Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; The... - 361.029 1.39E-122 12 - 382 superfamily 266485

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_41413 PHATRDRAFT_41413 181932 213251 198627 Not available AT5G16990.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008270 GO:0016491 -

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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