264145 HAThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
264145	chr_14	HA	344269	345507	-	HA

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450868	Thaps264145.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0404

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0152	0.38	0.14 0.024

Most Highly Correlated Transcripts

bd716 (bd716) MviM 0.9263	3590 Ion_trans_2 0.8752	5340 hypothetical protein 0.8744	bd1941 (bd1941) NA 0.8685	39767 TLP_HIUase 0.8678	39241 Ras_like_GTPase superfamily 0.867
12021 hypothetical protein 0.8662	34042 Abhydrolase_6 0.8656	25325 hypothetical protein 0.8574	15819 Arginase_HDAC superfamily 0.8549

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HA superfamily		Helicase associated domain; This short domain is found in multiple copies in bacterial helicase...	-	78.8864	1.62E-18	301 - 366	superfamily	251968
HA superfamily		Helicase associated domain; This short domain is found in multiple copies in bacterial helicase...	-	78.8864	1.62E-18	301 - 366	superfamily	251968

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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