264350 (Tp_CCHH1_Myb2R10) Bromodomain superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264350 chr_15 (Tp_CCHH1_Myb2R10) Bromodomain superfamily 913293 913802 - Bromodomain superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443996 Thaps264350.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0326

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0076
 0.36

Most Highly Correlated Transcripts

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9291

bd643

(bd643) NA
0.9142

bd1839

(bd1839) NA
0.9133

bd1934

(bd1934) NA
0.913

bd690

(bd690) NA
0.9124

bd1756

(bd1756) NA
0.8958

6720

hypothetical protein
0.8951

bd410

(bd410) HNHc
0.8808

bd1841

(bd1841) CAP10 superfamily
0.8805

1249

hypothetical protein
0.8803

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Bromodomain superfamily Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone... - 60.0363 1.26E-12 110 - 164 superfamily 261339

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available 342104

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0006355 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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