264407 TIM_phosphate_binding superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264407 chr_17 TIM_phosphate_binding superfamily 30423 31326 + TIM_phosphate_binding superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450328 Thaps264407.2, Thaps264407.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0163

Most Highly Correlated Transcripts

bd1078

(bd1078) NA
0.913

bd1893

(bd1893) NA
0.9098

bd463

(bd463) Aa_trans superfamily
0.9058

bd624

(bd624) Glyco_transf_34 superfamily
0.8875

bd758

(bd758) NA
0.8861

bd846

(bd846) NA
0.8849

bd1765

(bd1765) NA
0.8839

bd843

(bd843) NA
0.8752

bd668

(bd668) NA
0.8752

bd687

(bd687) NA
0.8639

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 109.861 2.19E-28 59 - 275 superfamily 266538

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48186 PHATRDRAFT_48186 152224 211723 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004425 GO:0006568 -

GO:0004425

indole-3-glycerol-phosphate synthase activity

Details: 
Catalysis of the reaction: 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate = 1-(indol-3-yl)glycerol 3-phosphate + CO2 + H2O.
GO Category: 
MF

GO:0006568

tryptophan metabolic process

Details: 
The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.
GO Category: 
BP

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