264834 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264834 chr_22 HA 608765 610211 + HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7448205 Thaps264834.1, Thaps264834.2, Thaps264834.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0422

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0138
 0.36

Most Highly Correlated Transcripts

2159

hypothetical protein
0.9004

bd1934

(bd1934) NA
0.8813

21140

RING
0.879

11229

COG1272
0.8745

22957

hypothetical protein
0.8725

37854

Pex19 superfamily
0.8712

bd1840

(bd1840) NA
0.8681

39241

Ras_like_GTPase superfamily
0.8671

36995

LplA
0.8657

18662

ADK
0.8619

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 62.7081 1.38E-12 276 - 334 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 62.7081 1.38E-12 276 - 334 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 62.7081 1.38E-12 276 - 334 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 62.7081 1.38E-12 276 - 334 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 62.7081 1.38E-12 276 - 334 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 62.7081 1.38E-12 276 - 334 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 62.7081 1.38E-12 276 - 334 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 62.7081 1.38E-12 276 - 334 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments