11229 COG1272
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11229 chr_19a_19 COG1272 511189 514018 - COG1272

Synonyms

NCBI ID Ensembl Genomes exon ID
7449945 Thaps11229.1, Thaps11229.2, Thaps11229.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0422

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0109
 0.50

Most Highly Correlated Transcripts

11841

hypothetical protein
0.8791

264834

HA
0.8745

bd1806

(bd1806) AAT_I superfamily
0.8491

33312

NnrU superfamily
0.8354

6873

PRK05463
0.8342

11842

sigpep_I_bact
0.8281

37497

cysE
0.8231

2159

hypothetical protein
0.8143

1791

hypothetical protein
0.8129

bd643

(bd643) NA
0.8125

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG1272 Predicted membrane protein, hemolysin III homolog [General function prediction only] cl03831 182.822 1.31E-52 616 - 820 specific 224191
HlyIII superfamily Haemolysin-III related; Members of this family are integral membrane proteins. This family includes... - 182.822 1.31E-52 616 - 820 superfamily 261909

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 260622 204955 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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