268187 (ycf19_1) COG0762
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268187 chr_2 (ycf19_1) COG0762 381268 382218 - COG0762

Synonyms

NCBI ID Ensembl Genomes exon ID
7442235 Thaps268187.1, Thaps268187.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0028

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0120
 0.39

Most Highly Correlated Transcripts

270222

0.9458

37934

GRX_PICOT_like
0.9315

269624

TIM_phosphate_binding superfamily
0.9229

26991

GRX_GRXh_1_2_like
0.9186

4876

hypothetical protein
0.9138

9115

DnaJ
0.9073

261400

NA
0.906

18469

FkpA
0.9028

30701

PRK05279
0.9011

6348

GGCT_like
0.9001

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG0762 Predicted integral membrane protein [Function unknown] cl00508 64.1809 8.48E-14 134 - 217 specific 223833
YGGT superfamily YGGT family; This family consists of a repeat found in conserved hypothetical integral membrane... - 64.1809 8.48E-14 134 - 217 superfamily 260468

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14996 PHATRDRAFT_14996 187208 Not available 430688 Cre01.g052400.t1.2 AT5G36120.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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