268500 PRK05218
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268500 chr_3 PRK05218 1219856 1223423 - PRK05218

Synonyms

NCBI ID Ensembl Genomes exon ID
7451701 Thaps268500.1, Thaps268500.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0222

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0165
 0.36

Most Highly Correlated Transcripts

bd1667

(bd1667) Mpp10
0.9383

24550

W2_eIF4G1_like
0.9238

bd1709

(bd1709) NA
0.9071

32577

(ASDH) PLN02383
0.9023

23106

hypothetical protein
0.8627

7788

(Tp_CCHH23) regulator [Rayko]
0.8601

27873

PLN02274
0.8549

6250

reductase
0.852

21929

COG0116
0.8485

15992

COG0820
0.8484

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HSP90 superfamily Hsp90 protein; Hsp90 protein. - 457.308 4.57E-152 251 - 728 superfamily 249661
PRK05218 heat shock protein 90; Provisional - 705.335 0 65 - 729 multi-dom 235366

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 215026 319968 415924 Not available AT3G07770.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006457 GO:0051082 GO:0005524 GO:0003763 -

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0051082

unfolded protein binding

Details: 
Interacting selectively and non-covalently with an unfolded protein.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0003763

NA

Details: 
NA
GO Category: 
NA

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