268881 Mod_r superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268881 chr_5 Mod_r superfamily 930499 931850 + Mod_r superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449617 Thaps268881.3, Thaps268881.1, Thaps268881.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0111

Most Highly Correlated Transcripts

20998

HOOK
0.9092

31034

cyclophilin superfamily
0.9077

21788

hypothetical protein
0.9074

6093

hypothetical protein
0.9063

1818

hypothetical protein
0.8982

38331

YIP1 superfamily
0.8963

4302

DUF788 superfamily
0.8962

10898

hypothetical protein
0.8903

270222

0.8898

7588

hypothetical protein
0.8883

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mod_r superfamily Modifier of rudimentary (Mod(r)) protein; This family represents a conserved region approximately... - 80.4115 2.46E-18 227 - 373 superfamily 254100

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32539 PHATRDRAFT_32539 215058 50756 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Endocytosis map04144

GO Terms

Not available -

Add comment

Log in to post comments