269028 Methyltrans_RNA superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
269028	chr_6	Methyltrans_RNA superfamily	476478	477865	+	Methyltrans_RNA superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448558	Thaps269028.3, Thaps269028.2, Thaps269028.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0227

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0254	0.29	0.55 55

Most Highly Correlated Transcripts

4517 hypothetical protein 0.9065	37374 PseudoU_synth superfamily 0.8979	2350 hypothetical protein 0.8943	4372 hypothetical protein 0.8924	268443 SAICAR_synt_Sc 0.8905	23232 hypothetical protein 0.89
268859 (GGTB1) PLN03201 0.8894	20930 DRE_TIM_metallolyase superfamily 0.8874	32668 CRCB 0.8855	38472 HA2 0.8843

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Methyltrans_RNA superfamily		RNA methyltransferase; RNA methyltransferases modify nucleotides during ribosomal RNA maturation in...	-	86.8611	5.55E-20	101 - 374	superfamily	260530

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_32846	PHATRDRAFT_32846	231102	4466	230791	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005554 -

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