20930 DRE_TIM_metallolyase superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20930	chr_1	DRE_TIM_metallolyase superfamily	2070666	2072646	+	DRE_TIM_metallolyase superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443173	Thaps20930.5, Thaps20930.4, Thaps20930.2, Thaps20930.1, Thaps20930.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0231

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0254	0.29	0.55 55

Most Highly Correlated Transcripts

25247 Nudix_Hydrolase superfamily 0.9442	21698 hypothetical protein 0.931	22840 hypothetical protein 0.928	34596 WD40 0.9272	7838 hypothetical protein 0.9171	8541 PRK00142 0.9167
13308 PLN02948 0.9143	21959 hypothetical protein 0.9126	20859 SIR2 superfamily 0.9112	22965 SrmB 0.909

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DRE_TIM_metallolyase superfamily		DRE-TIM metallolyase superfamily; The DRE-TIM metallolyase superfamily includes 2-isopropylmalate...	-	149.38	7.36E-41	138 - 435	superfamily	267315

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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