269114 MDR superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269114 chr_6 MDR superfamily 1163319 1164512 + MDR superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445991 Thaps269114.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0208

Most Highly Correlated Transcripts

21168

hypothetical protein
0.9154

16295

FBPase
0.9083

6693

hypothetical protein
0.9006

8784

hypothetical protein
0.8992

3265

zf-C3HC superfamily
0.899

261400

NA
0.8953

22677

hypothetical protein
0.8928

263006

P4Hc
0.8926

268187

(ycf19_1) COG0762
0.8925

268908

Trans_IPPS_HH
0.8923

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MDR superfamily Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; The... - 265.131 8.81E-86 5 - 355 superfamily 266485
Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion... - 192.177 1.40E-57 5 - 354 multi-dom 223677

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 158929 209748 248084 Cre16.g674050.t1.2 AT3G56460.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008270 GO:0016491 GO:0003960 -

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0003960

NADPH:quinone reductase activity

Details: 
Catalysis of the reaction: NADPH + H+ + quinone = NADP+ + semiquinone.
GO Category: 
MF

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