269135 Tic22 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
269135	chr_6	Tic22 superfamily	1294011	1295357	+	Tic22 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453269	Thaps269135.1, Thaps269135.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0107

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0242	0.38	6400 20000

Most Highly Correlated Transcripts

bd1840 (bd1840) NA 0.9393	bd1877 (bd1877) NA 0.9089	bd1946 (bd1946) NA 0.9049	268054 hypothetical protein 0.9036	bd409 (bd409) Snf7 superfamily 0.8799	21677 hypothetical protein 0.8761
7006 hypothetical protein 0.8662	bd877 (bd877) NA 0.8653	268124 COG0429 0.8642	270222 0.8599

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Tic22 superfamily		Tic22-like family; The preprotein translocation at the inner envelope membrane of chloroplasts so...	-	66.316	9.82E-13	77 - 325	superfamily	262170

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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