269335 OCH1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269335 chr_8 OCH1 317165 318514 + OCH1

Synonyms

NCBI ID Ensembl Genomes exon ID
7450119 Thaps269335.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0447

Most Highly Correlated Transcripts

261400

NA
0.9088

261172

(ADH2) MDR superfamily
0.9024

13448

Sec1
0.8975

269624

TIM_phosphate_binding superfamily
0.8968

16114

PLN02350
0.896

16295

FBPase
0.8955

29850

PLN03132
0.8952

21434

AAA_26
0.8919

24758

hypothetical protein
0.8906

23492

hypothetical protein
0.8893

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif; The DXD motif is a short conserved... cl19952 92.3899 5.43E-23 115 - 199 specific 252625
Gly_transf_sug superfamily Glycosyltransferase sugar-binding region containing DXD motif; The DXD motif is a short conserved... - 92.3899 5.43E-23 115 - 199 superfamily 268305
OCH1 Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane] - 137.959 8.25E-37 65 - 360 multi-dom 226297

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 433823 Not available Not available 486818

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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