269541 M20_Acy1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269541 chr_10 M20_Acy1 1050980 1052398 - M20_Acy1

Synonyms

NCBI ID Ensembl Genomes exon ID
7449347 Thaps269541.3, Thaps269541.2, Thaps269541.1, Thaps269541.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0107

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0242
 0.38

Most Highly Correlated Transcripts

270222

0.9225

25171

DUF1517 superfamily
0.8978

263883

hypothetical protein
0.8948

bd1840

(bd1840) NA
0.8579

30178

PLN03050
0.8468

25019

hypothetical protein
0.8436

268453

PRK11183
0.8415

21161

Patched
0.8414

bd885

(bd885) NA
0.8293

3330

RGS
0.827

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
M20_Acy1 M20 Peptidase Aminoacylase 1 family; Peptidase M20 family, Aminoacylase 1 (ACY1; hippuricase;... cl14876 432.251 2.18E-150 2 - 361 specific 193507
Zinc_peptidase_like superfamily Zinc peptidases M18, M20, M28, and M42; Zinc peptidases play vital roles in metabolic and signaling... - 432.251 2.18E-150 2 - 361 superfamily 265470
AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] - 370.843 5.39E-126 2 - 365 multi-dom 224390

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_13725 PHATRDRAFT_13725 186599 263149 448118 Cre17.g728100.t1.2 AT3G02875.1 486256

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008237 GO:0004407 GO:0008418 GO:0008759 GO:0009017 GO:0016811 GO:0017159 GO:0018748 GO:0018749 GO:0047419 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008237

metallopeptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0004407

histone deacetylase activity

Details: 
Catalysis of the reaction: histone N6-acetyl-L-lysine + H2O = histone L-lysine + acetate. This reaction represents the removal of an acetyl group from a histone, a class of proteins complexed to DNA in chromatin and chromosomes.
GO Category: 
MF

GO:0008418

protein-N-terminal asparagine amidohydrolase activity

Details: 
Catalysis of the reaction: protein-L-asparagine + H2O = protein-L-aspartate + NH3. This reaction is the deamidation of an N-terminal asparagine residue in a peptide or protein.
GO Category: 
MF

GO:0008759

UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity

Details: 
Catalysis of the removal of an acetyl group from the 2-N position of glucosamine in the lipid A precursor UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine.
GO Category: 
MF

GO:0009017

succinylglutamate desuccinylase activity

Details: 
Catalysis of the reaction: N-succinyl-L-glutamate + H(2)O = L-glutamate + succinate.
GO Category: 
MF

GO:0016811

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides

Details: 
Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide.
GO Category: 
MF

GO:0017159

pantetheine hydrolase activity

Details: 
Catalysis of the reaction: (R)-pantetheine + H(2)O = (R)-pantothenate + cysteamine.
GO Category: 
MF

GO:0018748

iprodione amidohydrolase activity

Details: 
Catalysis of the reaction: iprodione + OH- = 3,5-dichlorophenylcarboximide + N-isopropylcarbamate.
GO Category: 
MF

GO:0018749

(3,5-dichlorophenylurea)acetate amidohydrolase activity

Details: 
Catalysis of the reaction: (3,5-dichlorophenylurea)acetate + OH- = 3,5-dichloroaniline + N-carboxyglycine.
GO Category: 
MF

GO:0047419

N-acetylgalactosamine-6-phosphate deacetylase activity

Details: 
Catalysis of the reaction: H2O + N-acetyl-D-galactosamine 6-phosphate = acetate + D-galactosamine 6-phosphate.
GO Category: 
MF

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