269725 PLN00113Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
269725	chr_14	PLN00113	109926	111816	-	PLN00113

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450822	Thaps269725.3, Thaps269725.2, Thaps269725.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0474

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0115	0.37	35 250

Most Highly Correlated Transcripts

21090 hypothetical protein 0.8667	37727 S_TKc 0.8654	18392 RabGAP-TBC 0.8542	33851 IBR 0.8484	25782 hypothetical protein 0.844	269820 2A43 0.8378
23072 hypothetical protein 0.8352	23483 BTB 0.8334	23615 hypothetical protein 0.832	1900 hypothetical protein 0.826

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN00113		leucine-rich repeat receptor-like protein kinase; Provisional	-	77.1956	3.71E-15	342 - 445	multi-dom	215061

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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