269792 (ANX1) AnnexinThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
269792	chr_14	(ANX1) Annexin	780898	782607	-	Annexin

Synonyms

NCBI ID	Ensembl Genomes exon ID
7441813	Thaps269792.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0104

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0041	0.50

Most Highly Correlated Transcripts

270222 0.8058	7536 hypothetical protein 0.8039	31885 S_TKc 0.7858	10532 hypothetical protein 0.7748	19977 TRX_family 0.7638	3763 hypothetical protein 0.7589
8675 DUF4336 superfamily 0.7561	25193 hypothetical protein 0.755	36995 LplA 0.7538	264494 SIR2 superfamily 0.7528

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Annexin		Annexin; This family of annexins also includes giardin that has been shown to function as an...	cl02574	65.5451	7.08E-14	98 - 160	specific	249668
Annexin superfamily		Annexin; This family of annexins also includes giardin that has been shown to function as an...	-	65.5451	7.08E-14	98 - 160	superfamily	261355

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_54190	PHATRDRAFT_54190	Not available	Not available	Not available	Not available	AT1G68090.1	561117

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005509 GO:0005544 GO:0050819 GO:0047394 -

Add comment

Log in to post comments