270065 WD40 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
270065 chr_22 WD40 superfamily 187396 189283 - WD40 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443681 Thaps270065.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0119

Most Highly Correlated Transcripts

36995

LplA
0.8896

40995

phr2
0.8683

19158

GRX_PICOT_like
0.8658

1676

hypothetical protein
0.8589

4295

hypothetical protein
0.8588

268577

(GGTA1) PLN02789
0.8558

40293

TRX_family
0.8539

30701

PRK05279
0.8535

24525

hypothetical protein
0.8529

16295

FBPase
0.8526

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 85.8496 6.58E-19 240 - 523 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 70.5027 2.53E-13 154 - 461 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9860 PHATRDRAFT_9860 250868 178470 462168 Cre16.g693750.t1.1 AT3G20740.1 552795

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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