27873 PLN02274
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
27873 chr_4 PLN02274 1076639 1078120 + PLN02274

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps27873.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0257
 0.20

Most Highly Correlated Transcripts

268688

hypothetical protein
0.9994

bd1876

(bd1876) NatB_MDM20 superfamily
0.9573

268678

(Tp_Myb2R3) ZUO1
0.9499

40223

PLN02347
0.9486

3583

PRK13796
0.9481

24016

Ebp2 superfamily
0.9463

23718

hypothetical protein
0.9436

34006

Sun
0.9436

261462

hypothetical protein
0.9421

268145

PLN00040
0.9414

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-... cl17186 448.505 1.76E-155 8 - 472 specific 238223
TIM_phosphate_binding superfamily TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an... - 448.505 1.76E-155 8 - 472 superfamily 266538
CBS_pair_IMPDH_2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the... cl15354 182.017 3.16E-55 94 - 207 specific 239975
CBS_pair superfamily The CBS domain, named after human CBS, is a small domain originally identified in cystathionine... - 182.017 3.16E-55 94 - 207 superfamily 265675
PLN02274 inosine-5'-monophosphate dehydrogenase - 878.616 0 7 - 493 multi-dom 215154

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_31718 PHATRDRAFT_31718 262756 238327 454744 Cre14.g614300.t1.2 AT1G16350.1 480661

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0003938 GO:0006177 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0003938

IMP dehydrogenase activity

Details: 
Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+.
GO Category: 
MF

GO:0006177

GMP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate.
GO Category: 
BP

Add comment

Log in to post comments