3583 PRK13796Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
3583	chr_3	PRK13796	1304886	1305649	+	PRK13796

Synonyms

NCBI ID	Ensembl Genomes exon ID
7441913	Thaps3583.2, Thaps3583.1, Thaps3583.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0220

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0272	0.25	4.6 32

Most Highly Correlated Transcripts

27873 PLN02274 0.9481	bd190 (bd190) SrmB 0.9429	bd1876 (bd1876) NatB_MDM20 superfamily 0.9409	21050 Ras_like_GTPase superfamily 0.9225	37965 S1_like superfamily 0.9144	268688 hypothetical protein 0.9064
261109 NBD_sugar-kinase_HSP70_actin superfamily 0.906	36434 DUF1253 0.9057	264345 SpoU 0.9012	262275 hypothetical protein 0.9008

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PRK13796		GTPase YqeH; Provisional	-	83.3716	6.92E-20	18 - 114	multi-dom	237511

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_40200	PHATRDRAFT_40200	172393	236301	194176	Not available	AT3G57180.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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