29057 P-ATPase-V
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
29057 chr_7 P-ATPase-V 1893017 1898045 + P-ATPase-V

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0198

Most Highly Correlated Transcripts

20865

DUF1162 superfamily
0.9328

36372

S_TKc
0.9116

24828

CAP_GLY
0.9059

21268

zf-CXXC
0.9026

25288

Sec6 superfamily
0.9022

261045

PI3Kc_like superfamily
0.9017

12836

EEP superfamily
0.899

262371

AAA_12 superfamily
0.8971

5760

SART-1
0.8912

bd1777

(bd1777) NA
0.8901

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
E1-E2_ATPase superfamily E1-E2 ATPase; E1-E2 ATPase. - 91.8614 1.78E-20 139 - 406 superfamily 249606
E1-E2_ATPase superfamily E1-E2 ATPase; E1-E2 ATPase. - 91.8614 1.78E-20 139 - 406 superfamily 249606
P-ATPase-V P-type ATPase of unknown pump specificity (type V); These P-type ATPases form a distinct clade but... - 764.601 0 1 - 1085 multi-dom 233513

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_54805 PHATRDRAFT_54805 206011 233650 462143 Cre17.g744447.t1.1 AT5G23630.1 311397

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016787 GO:0005524 GO:0006812 GO:0015662 GO:0016020 GO:0003824 GO:0016021 GO:0016887 GO:0016820 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016787

hydrolase activity

Details: 
Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006812

cation transport

Details: 
The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0015662

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate.
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0016887

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

GO:0016820

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Details: 
Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane.
GO Category: 
MF

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