29322 AAT_I superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
29322	chr_9	AAT_I superfamily	608041	609696	-	AAT_I superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448065	Thaps29322.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0130

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0180	0.31	110000 16

Most Highly Correlated Transcripts

25264 hypothetical protein 0.9148	21429 hypothetical protein 0.9092	25506 hypothetical protein 0.9092	9364 hypothetical protein 0.9064	20753 PDI_a_family 0.9027	34514 PLN02539 0.8989
21722 Aldo_ket_red 0.8982	263836 Ggt 0.8982	22297 VPS9 superfamily 0.8961	3922 hypothetical protein 0.8954

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAT_I superfamily		Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent...	-	102.45	9.07E-26	2 - 138	superfamily	267298

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_15730	PHATRDRAFT_15730	Not available	Not available	102422	Cre03.g155051.t1.1	AT1G27980.1	346729

KEGG

KEGG description	KEGG Pathway
Metabolic pathways	map01100

GO Terms

Not available -

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