30913 PMSR superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
30913 chr_1 PMSR superfamily 875721 876221 + PMSR superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442916 Thaps30913.1, Thaps30913.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0444

Most Highly Correlated Transcripts

7611

hypothetical protein
0.8411

37497

cysE
0.8195

2571

hypothetical protein
0.8188

41655

Chloroa_b-bind
0.8174

24133

hypothetical protein
0.8155

16295

FBPase
0.8112

2312

hypothetical protein
0.8107

24853

hypothetical protein
0.8107

21157

hypothetical protein
0.8101

21271

hypothetical protein
0.8089

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PMSR superfamily Peptide methionine sulfoxide reductase; This enzyme repairs damaged proteins. Methionine sulfoxide... - 135.03 8.61E-41 1 - 126 superfamily 260385

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12243 PHATRDRAFT_12243 265950 180791 56342 Cre13.g570900.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006464 GO:0008113 -

GO:0006464

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

GO:0008113

peptide-methionine (S)-S-oxide reductase activity

Details: 
Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin, and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin. Can act on oxidized methionine in peptide linkage with specificity for the S enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin.
GO Category: 
MF

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