31091 (NDK3) NDPk_I
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31091 chr_1 (NDK3) NDPk_I 1169738 1170273 - NDPk_I

Synonyms

NCBI ID Ensembl Genomes exon ID
7442887 Thaps31091.2, Thaps31091.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0070

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0182
 0.48

Most Highly Correlated Transcripts

32321

TRX_family
0.9208

36235

p450 superfamily
0.9009

bd846

(bd846) NA
0.8938

bd765

(bd765) NA
0.8898

bd1081

(bd1081) NA
0.888

38306

Chloroa_b-bind
0.8823

32924

RPE
0.8705

bd1645

(bd1645) tpt
0.8672

976

hypothetical protein
0.8644

35878

PLN02307
0.8637

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NDPk_I Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large... cl00335 234.67 7.63E-80 4 - 133 specific 239876
NDPk superfamily Nucleoside diphosphate kinases (NDP kinases, NDPks): NDP kinases, responsible for the synthesis of... - 234.67 7.63E-80 4 - 133 superfamily 260363
NDK Nucleoside diphosphate kinase; Nucleoside diphosphate kinase. - 228.511 2.34E-77 4 - 135 multi-dom 249778

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_25127 PHATRDRAFT_25127 Not available 296786 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0004550 GO:0005524 GO:0006183 GO:0006228 GO:0006241 -

GO:0004550

nucleoside diphosphate kinase activity

Details: 
Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006183

GTP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate.
GO Category: 
BP

GO:0006228

UTP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate.
GO Category: 
BP

GO:0006241

CTP biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate.
GO Category: 
BP

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