31402 DUF3007 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
31402	chr_1	DUF3007 superfamily	1191340	1191516	+	DUF3007 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451424	Thaps31402.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0029

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0120	0.39	0.0037 0.51

Most Highly Correlated Transcripts

3379 hypothetical protein 0.8922	38608 SDR_a5 0.8906	6348 GGCT_like 0.8855	31829 CBS_like 0.8828	260962 RHOD superfamily 0.8816	5545 hypothetical protein 0.8788
8872 hypothetical protein 0.8771	37934 GRX_PICOT_like 0.8749	3341 hypothetical protein 0.8741	261882 Thioredoxin_like superfamily 0.873

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF3007 superfamily		Protein of unknown function (DUF3007); This is a family of uncharacterized proteins found in...	-	60.4159	9.46E-14	1 - 54	superfamily	256468

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_46071	PHATRDRAFT_46071	198346	248218	420144	Cre01.g000850.t1.2	AT3G17930.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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