31406 (ARF4) Arl3
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
31406 chr_1 (ARF4) Arl3 2334952 2335491 + Arl3
NCBI ID Ensembl Genomes exon ID
7449043 Thaps31406.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0411
Normalized Mean Residue
Thaps_bicluster_0275
0.38
(bd415) arom_aa_hydroxylase superfamily
0.9428
(bd690) NA
0.9292
(bd643) NA
0.9276
(bd410) HNHc
0.9196
(bd877) NA
0.9183
(bd1934) NA
0.906
Dynein_heavy superfamily
0.9052
WD40 superfamily
0.8865
(bd1841) CAP10 superfamily
0.8854
hypothetical protein
0.8827
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Arl3 Arf-like 3 (Arl3) GTPase; Arl3 (Arf-like 3) is an Arf family protein that differs from most Arf... cl17170 278.511 5.59E-96 3 - 175 specific 206721
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 278.511 5.59E-96 3 - 175 superfamily 266525
COG1100 GTPase SAR1 and related small G proteins [General function prediction only] - 91.1755 8.71E-23 15 - 138 multi-dom 224025
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 105672 Cre04.g218250.t1.2 Not available 337530
KEGG description KEGG Pathway
Not available Not available
GO:0004871 GO:0007186 GO:0005525 GO:0007264 GO:0006886 GO:0003924 GO:0003925 -

signal transducer activity

Details: 
Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
GO Category: 
MF

G-protein coupled receptor signaling pathway

Details: 
A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription.
GO Category: 
BP

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

small GTPase mediated signal transduction

Details: 
Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
GO Category: 
BP

intracellular protein transport

Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO Category: 
BP

GTPase activity

Details: 
Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA
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