31575 AAA_12
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31575 chr_1 AAA_12 1024285 1027712 - AAA_12

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0315

Most Highly Correlated Transcripts

261056

(APB3) Adaptin_N
0.9247

23130

NT_PAP_TUTase
0.9218

35129

(Tp_Myb2R9) PLN03142
0.914

14527

Sugar_tr
0.9058

9270

hypothetical protein
0.904

2587

O-FucT_like
0.9035

262797

Sec7
0.902

7299

hypothetical protein
0.8994

268475

C2 superfamily
0.8985

264276

Vps8 superfamily
0.894

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_12 superfamily AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 228.202 1.32E-68 495 - 714 superfamily 257490
AAA_12 superfamily AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 228.202 1.32E-68 495 - 714 superfamily 257490
AAA_11 AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 193.226 3.37E-56 259 - 487 multi-dom 257489

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_29532 PHATRDRAFT_29532 Not available 321806 469076 Cre10.g442650.t1.2 AT2G03270.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0008026 GO:0000166 GO:0017111 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0008026

ATP-dependent helicase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.
GO Category: 
MF

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

Add comment

Log in to post comments