31705 Mpv17_PMP22
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31705 chr_2 Mpv17_PMP22 1329014 1329613 + Mpv17_PMP22

Synonyms

NCBI ID Ensembl Genomes exon ID
7443023 Thaps31705.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0102

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0131
 0.35

Most Highly Correlated Transcripts

31169

PRX_BCP
0.9103

261608

PLN02585
0.8938

26991

GRX_GRXh_1_2_like
0.8918

28125

PLN00203
0.8801

269147

NAD_binding_8 superfamily
0.8612

36641

Aldolase_Class_I superfamily
0.8528

268908

Trans_IPPS_HH
0.8455

33353

TRX_family
0.8446

20405

GRX_GRXh_1_2_like
0.8334

2577

hypothetical protein
0.8286

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mpv17_PMP22 superfamily Mpv17 / PMP22 family; The 22-kDa peroxisomal membrane protein (PMP22) is a major component of... - 82.2783 8.78E-21 118 - 185 superfamily 252388
Mpv17_PMP22 superfamily Mpv17 / PMP22 family; The 22-kDa peroxisomal membrane protein (PMP22) is a major component of... - 82.2783 8.78E-21 118 - 185 superfamily 252388

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_22819 PHATRDRAFT_22819 167937 224059 435533 Cre06.g297900.t1.1 Not available 359986

KEGG

KEGG description KEGG Pathway
Peroxisome map04146

GO Terms

GO:0016021 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

Add comment

Log in to post comments