31818 Mito_carr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31818 chr_2 Mito_carr 908854 909828 - Mito_carr

Synonyms

NCBI ID Ensembl Genomes exon ID
7450248 Thaps31818.1, Thaps31818.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0416

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0150
 0.38

Most Highly Correlated Transcripts

269095

AdoMet_MTases
0.9174

268374

(PDHA1) TPP_E1_PDC_ADC_BCADC
0.9058

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9036

260934

PLPDE_IV superfamily
0.8981

bd1839

(bd1839) NA
0.8922

bd1841

(bd1841) CAP10 superfamily
0.8892

268280

(LAT2) PDHac_trf_mito
0.8846

bd1756

(bd1756) NA
0.883

bd410

(bd410) HNHc
0.8742

9499

Hydrolase_3
0.871

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 82.2971 4.76E-20 5 - 101 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 82.2971 4.76E-20 5 - 101 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 82.2971 4.76E-20 5 - 101 superfamily 249634
Mito_carr superfamily Mitochondrial carrier protein; Mitochondrial carrier protein. - 82.2971 4.76E-20 5 - 101 superfamily 249634

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_18489 PHATR_18489 197053 299969 63977 Not available Not available 560086

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0016020 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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