268374 (PDHA1) TPP_E1_PDC_ADC_BCADC
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268374 chr_2 (PDHA1) TPP_E1_PDC_ADC_BCADC 2164412 2165761 + TPP_E1_PDC_ADC_BCADC

Synonyms

NCBI ID Ensembl Genomes exon ID
7450426 Thaps268374.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0416

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0150
 0.38

Most Highly Correlated Transcripts

264005

Glyco_hydrolase_16 superfamily
0.9398

269160

(gltD) GltD
0.921

31818

Mito_carr
0.9058

9499

Hydrolase_3
0.896

268280

(LAT2) PDHac_trf_mito
0.8956

32366

Pumilio
0.8827

41979

PRK06116
0.8791

21640

Iso_dh superfamily
0.8789

19158

GRX_PICOT_like
0.8785

21177

(LAT1_2) lipoyl_domain
0.8746

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of... cl01629 358.731 1.15E-122 38 - 332 specific 238958
TPP_enzymes superfamily Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes... - 358.731 1.15E-122 38 - 332 superfamily 261022

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_55035 PHATRDRAFT_55035 193273 214330 359239 Cre07.g337650.t1.2 AT1G24180.1 353479

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0008152 GO:0016624 GO:0004739 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016624

oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide.
GO Category: 
MF

GO:0004739

pyruvate dehydrogenase (acetyl-transferring) activity

Details: 
Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2.
GO Category: 
MF

Add comment

Log in to post comments