31951 MMT1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31951 chr_2 MMT1 878469 879902 + MMT1

Synonyms

NCBI ID Ensembl Genomes exon ID
7450241 Thaps31951.2, Thaps31951.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0009

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0120
 0.39

Most Highly Correlated Transcripts

270222

0.9092

1773

hypothetical protein
0.9056

6348

GGCT_like
0.8915

8872

hypothetical protein
0.8856

260962

RHOD superfamily
0.8836

21444

hypothetical protein
0.8833

37934

GRX_PICOT_like
0.8821

268908

Trans_IPPS_HH
0.8789

4876

hypothetical protein
0.8744

5074

hypothetical protein
0.8743

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] cl00316 148.556 8.28E-41 149 - 444 specific 223131
Cation_efflux superfamily Cation efflux family; Members of this family are integral membrane proteins, that are found to... - 148.556 8.28E-41 149 - 444 superfamily 260348

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48955 PHATRDRAFT_48955 164769 153478 42242 Cre03.g160800.t1.2 AT3G58060.1 552775

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006812 GO:0008324 GO:0016020 -

GO:0006812

cation transport

Details: 
The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0008324

cation transmembrane transporter activity

Details: 
Catalysis of the transfer of cation from one side of the membrane to the other.
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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