32252 (RPI2) RPI_A
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
32252 chr_2 (RPI2) RPI_A 1066221 1067180 - RPI_A

Synonyms

NCBI ID Ensembl Genomes exon ID
7450358 Thaps32252.2, Thaps32252.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0049

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0114
 0.48

Most Highly Correlated Transcripts

6264

PLN02256
0.8923

31424

(AAT2) Aminotran_1_2
0.8895

11397

hypothetical protein
0.8872

25040

NA
0.887

41005

odpB
0.8803

23527

hypothetical protein
0.8793

30981

NADB_Rossmann superfamily
0.8754

262977

NA
0.8728

9830

(CBL1) CGS_like
0.8717

3318

hypothetical protein
0.8594

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RPI_A RPI_A: Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible... cl00339 306.706 1.03E-104 51 - 277 specific 238692
SugarP_isomerase superfamily SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (... - 306.706 1.03E-104 51 - 277 superfamily 260367

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0004751 GO:0009052 -

GO:0004751

ribose-5-phosphate isomerase activity

Details: 
Catalysis of the reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate.
GO Category: 
MF

GO:0009052

pentose-phosphate shunt, non-oxidative branch

Details: 
The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P.
GO Category: 
BP

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