3238 ANKThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
3238	chr_3	ANK	479328	480124	-	ANK

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444037	Thaps3238.1, Thaps3238.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0490

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0026	0.39

Most Highly Correlated Transcripts

263864 0.8861	bd799 (bd799) ZnMc_pappalysin_like 0.7463	8234 hypothetical protein 0.7158	11623 HSF_DNA-bind superfamily 0.6878	9655 hypothetical protein 0.6815	21840 (Tp_HSF_2b) regulator [Rayko] 0.6709
25899 hypothetical protein 0.6643	bd811 (bd811) NA 0.6596	bd153 (bd153) NA 0.6585	bd1835 (bd1835) NA 0.658

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	65.0974	7.32E-14	57 - 195	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	65.0974	7.32E-14	57 - 195	superfamily	238125

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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